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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906472.1_cds_XP_016456629.1_50444
CDS Infomation

[gene=LOC107780591] [db_xref=GeneID:107780591] [protein=large proline-rich protein BAG6-like] [protein_id=XP_016456629.1] [location=complement(join(47904..47912,48901..48981,49163..49500,50170..50577,50706..50838,50923..50994,51107..51271,52248..52423,52520..52589,52743..52886,57317..57382,57480..57598,58060..58131,58244..58361,58715..58843))] [gbkey=CDS]
Sequence

ATGGGTAACAACGGTGCTGAGGACGTAAAAATTTGTGGGTTTGATGATGCTAAATGTCCT
GAGACCACTGTTGAAATAAAGATAAAGACATTGGACTCGCAGACATATACATTACGAGTG
GATAAATGTGTTCCAGTTCCAGCACTGAAGGAACAAATTGCCACAGTTACTGGTGTCTTG
TCAGAACAACAACGGCTCATATGCCGGGGGAAAGTGTTGAAGGATGATCAGCTCCTTTCA
GCTTACCATGTAGAAGATGGACACACTTTGCATTTGGTTGTGAGGCAACCTTCATCAGAG
AGCACCCCTGATCCTCAAGGGACTGCTTCTGCATCAAGTTCTGGGCATATTCAAGGAAAC
CGAGTGGGTCCTGGTGTAGTTGTTGGAACGTACAACTTATCCGAACACGGAGATGGAACT
TTCCCTGACCTGAATCGGATTATCTCAGCTGTGCTTGGGTCATTTGGAGTTGCAAGCGTT
GGCAACGAGGGGATTGATCTCAATGGTCTTGGTGCAGCTAGTATGGGAAATATGAGAAAT
TCTGACCAACTGCCGACTGAACATGCTAGTACAACCAATCAATCTGGTTCCGGTATTGGC
GCTTCTGCACGTGCAACAGGTTTCCCAGTGGAAGCTCTGCAACCGCCGGTTATTCCCGAT
TCTCTGACAACTTTAACACAGTATTTGACTAATTTGACTGAAGAGTTCAGAGCAAATGCA
AGGAGACAAAGTGAGATTGCACTAACTGCTGGGATCTGTGGAGCTGATAGACCAGATTCT
AATGCACCCTCACATACCACTAGACAGAGAGGCCTTCCAACGCCTGCATCCTTGGGAGAG
GTGATGCTCTCGATGCAACGATTACTCACTGAACAAGCTGCAGAGTGCTTGTTGCAATTT
TCGAAGCTGCTAGAGAATCAAGCAAATATCACAGAACCAACACAAAGATTGAGAATTCAA
TCGCATGCTTTAAGAACTGGAGATCTATTCCAAAAATTAGGTGCTTTGCTGCTTGAGCTT
GGTCGGACAACAATGACATTGCGAATGGGTCAAACAGCGGATGATGCTGTGGTGAATGCT
GGACCTGCTGTTTTTGTGTCTACTGCTGGCCCTAATCCTATTATGGTTCAGCCACTACCT
TTCCAGCCGGGTGCAAATTTTGGTGCCATTCCTGTTGGAACTGTACAAAATGACGGTGGA
CTTTCTGGACCATCTATTGGTTCTGGTTTTACTCCTAGGAATATTGACATCAGAATACGA
ACAGGTTCATTTACGCCTTCAACTCTTAATCGAAGAGAGCCTGCTGGTTCACAGCGTCCA
GTTCAAGCTACTCCTGCAGCTTCTAATGGTGGAAATCCTGATGAAGAGACCAATGGAGGC
GCTAGAAGCTCTTCTGCCATGGAGTCTGGAGTGCGGGTGGTTCCTATCAGGACAGTCGTT
ACTACAGTTCCAGCTTCTGTTGGGCATTCAGCTTCTGATTCATCTCGAGGTTCCATGGGA
TTATTTTATCCAGTTTTAGCAAGAGTTCAACATATCAGCTCCAGGAATTCTAATAATTCT
GCAGCTGCTCAAGCATCTGCCGTAAATAATTCACATGAAGTTGAGGCTGAACAACCGCCT
AATCCTGATTCTGCTGGGGAACGGCAAACTAGTGGATTTGCTGGTGCTGAAGGTAATTTT
GGCTCATTTAGTGAACTATCAAGCAGTGACGAGTTCTCCACACAGTTCCAAAGTAGAATT
GACCAAATTTATAGGTCATTTTTCACTGGAGAAAATCCACATCCTGAGAATGTCATTGGA
GGTAACAATTCTGCCACTGGAGGTAGTGTGGCTGCTGAAGACATTGGTAATTCTCAGGCT
ACGGCCATGGCAGCAGGCGAGGAAGGAGTTATTTTGTCAAATATACTTCGTCATATCATG
CCGATTATCTCTGAATCTGCAGGAACTGATAATTCATCTAGTGATAGACCAAATCTTGAC
GAGGATAGAAGTGACCATGGTTCAATGCAGGATCAAGAAAACATGGAGCAAGCAAGTTCT
TCAGACAGGTGCCACAATCTTTCATTGCCACCAAGTTCAAAGCGTCAAAAGCGAGAATGA

Peptide Sequence

PEP ID

XP_016456629.1
PEP Infomation

PREDICTED: large proline-rich protein BAG6-like [Nicotiana tabacum]
Sequence

MGNNGAEDVKICGFDDAKCPETTVEIKIKTLDSQTYTLRVDKCVPVPALKEQIATVTGVL
SEQQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPSSESTPDPQGTASASSSGHIQGN
RVGPGVVVGTYNLSEHGDGTFPDLNRIISAVLGSFGVASVGNEGIDLNGLGAASMGNMRN
SDQLPTEHASTTNQSGSGIGASARATGFPVEALQPPVIPDSLTTLTQYLTNLTEEFRANA
RRQSEIALTAGICGADRPDSNAPSHTTRQRGLPTPASLGEVMLSMQRLLTEQAAECLLQF
SKLLENQANITEPTQRLRIQSHALRTGDLFQKLGALLLELGRTTMTLRMGQTADDAVVNA
GPAVFVSTAGPNPIMVQPLPFQPGANFGAIPVGTVQNDGGLSGPSIGSGFTPRNIDIRIR
TGSFTPSTLNRREPAGSQRPVQATPAASNGGNPDEETNGGARSSSAMESGVRVVPIRTVV
TTVPASVGHSASDSSRGSMGLFYPVLARVQHISSRNSNNSAAAQASAVNNSHEVEAEQPP
NPDSAGERQTSGFAGAEGNFGSFSELSSSDEFSTQFQSRIDQIYRSFFTGENPHPENVIG
GNNSATGGSVAAEDIGNSQATAMAAGEEGVILSNILRHIMPIISESAGTDNSSSDRPNLD
EDRSDHGSMQDQENMEQASSSDRCHNLSLPPSSKRQKRE

Transcript Sequence

Gene sequence data has not been registered.